26 {
28
29 try {
30
31
33 PetscBool flg_file = PETSC_FALSE;
34 CHKERR PetscOptionsBegin(PETSC_COMM_WORLD,
"",
"Field to vertices options",
35 "none");
36 CHKERR PetscOptionsString(
"-my_file",
"mesh file name",
"",
"mesh.h5m",
38 ierr = PetscOptionsEnd();
40
41 moab::Core mb_instance;
42 moab::Interface &moab = mb_instance;
43 ParallelComm *pcomm = ParallelComm::get_pcomm(&moab,
MYPCOMM_INDEX);
44 if (pcomm == NULL)
45 pcomm = new ParallelComm(&moab, PETSC_COMM_WORLD);
46 const char *option;
47 option = "";
49
50
52
53 if (flg_file != PETSC_TRUE) {
55 "*** ERROR -my_file (MESH FILE NEEDED)");
56 }
57
58 Range all_tets, topo_nodes, mid_nodes;
59 CHKERR moab.get_entities_by_type(0, MBTET, all_tets);
60 CHKERR moab.get_connectivity(all_tets, topo_nodes,
true);
61 CHKERR moab.get_connectivity(all_tets, mid_nodes,
false);
62 std::cout << "\n Mesh contains of " << mid_nodes.size()
63 << " nodes in total. ";
64 mid_nodes = subtract(mid_nodes, topo_nodes);
65 std::cout << mid_nodes.size() << " higher order nodes. \n";
66
67 for (int dim : {1, 2, 3}) {
69 CHKERR moab.create_meshset(MESHSET_SET, sub_meshset);
71 CHKERR moab.get_entities_by_dimension(0, dim, edges,
false);
72 CHKERR moab.add_entities(sub_meshset, edges);
73 CHKERR moab.convert_entities(sub_meshset,
false,
false,
74 false );
75 }
76
78 CHKERR moab.get_entities_by_type(0, MBVERTEX, new_nodes);
79 PetscPrintf(PETSC_COMM_WORLD, "New number of nodes: %d. \n",
80 new_nodes.size());
81 PetscPrintf(PETSC_COMM_WORLD, "Saving file out.h5m... \n");
82
83 CHKERR moab.write_file(
"out.h5m");
84 }
86
88
89 return 0;
90}
#define CATCH_ERRORS
Catch errors.
#define MYPCOMM_INDEX
default communicator number PCOMM
#define CHKERRG(n)
Check error code of MoFEM/MOAB/PETSc function.
#define CHKERR
Inline error check.
static MoFEMErrorCodeGeneric< PetscErrorCode > ierr
static MoFEMErrorCode Initialize(int *argc, char ***args, const char file[], const char help[])
Initializes the MoFEM database PETSc, MOAB and MPI.
static MoFEMErrorCode Finalize()
Checks for options to be called at the conclusion of the program.